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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR12452.1Putative integral membrane protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs. (155 aa)    
Predicted Functional Partners:
ftsH
Putative transmembrane AAA-metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.923
EAR12447.1
COG4877 Uncharacterized protein conserved in bacteria.
 
    0.910
EAR12450.1
Hypothetical protein.
       0.689
EAR12451.1
Hypothetical protein.
       0.689
EAR11596.1
Hypothetical protein.
 
 
    0.653
EAR12449.1
Hypothetical protein.
       0.512
EAR12303.1
COG0572 Uridine kinase.
    
  0.510
EAR13304.1
AAA ATPase, CDC48; COG0464 ATPases of the AAA+ class.
    
  0.465
EAR12448.1
Hypothetical protein.
       0.462
EAR11680.1
COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid).
   
  0.428
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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