Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR12461.1Hypothetical protein. (213 aa)    
Predicted Functional Partners:
EAR12459.1
COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
   
   0.820
EAR12460.1
Na(+) dependent transporter,Sodium Bile acid symporter family protein; COG0385 Predicted Na+-dependent transporter.
 
     0.806
EAR12886.1
Hypothetical protein; COG0151 Phosphoribosylamine-glycine ligase.
 
     0.789
EAR13231.1
Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
 
    0.788
EAR11936.1
Hypothetical protein.
 
     0.788
EAR13621.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
 
     0.785
EAR12792.1
Hypothetical protein.
 
     0.778
EAR13638.1
Tetratricopeptide repeat domain protein; COG0457 FOG: TPR repeat.
  
     0.766
EAR12462.1
Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
       0.743
EAR12787.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
    
 0.649
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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