Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAR12469.1TPR/glycosyl transferase domain protein; COG0438 Glycosyltransferase. (421 aa)    
Predicted Functional Partners:
EAR12470.1
COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
  
    0.849
EAR12468.1
COG0438 Glycosyltransferase.
 
     0.821
EAR12467.1
Hypothetical protein.
       0.773
EAR12466.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
 
     0.668
glgB
Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.592
EAR12465.1
Hypothetical protein.
       0.573
EAR13062.1
Hypothetical protein.
  
     0.499
EAR13177.1
Hypothetical protein; COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases.
  
     0.446
EAR13793.1
Hypothetical protein.
  
 
  0.416
EAR12464.1
Hypothetical protein.
       0.408
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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