STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR12475.1Putative ParB-like chromosome partitioning protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family. (294 aa)    
Predicted Functional Partners:
EAR12476.1
SpoOJ regulator protein; COG1192 ATPases involved in chromosome partitioning.
 
 0.998
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
     
 0.833
EAR12474.1
Hypothetical protein; COG1175 ABC-type sugar transport systems, permease components.
       0.818
EAR13066.1
Putative FtsK/SpoIIIE-like protein; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
  
   
 0.787
EAR11672.1
Hypothetical protein.
  
 
 0.727
EAR11772.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
 
 0.727
EAR13224.1
Hypothetical protein.
  
 
 0.727
rsmG
Glucose-inhibited division protein B; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.720
EAR12472.1
COG0681 Signal peptidase I; Belongs to the peptidase S26 family.
     
 0.660
EAR12471.1
Hypothetical protein; COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains).
       0.645
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.