Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR12505.1Hypothetical protein. (103 aa)    
Predicted Functional Partners:
EAR12648.1
Sensory transduction histidine kinase; COG0784 FOG: CheY-like receiver.
  
 0.923
EAR12891.1
FixL-related histidine kinase; COG2202 FOG: PAS/PAC domain.
  
 0.921
EAR11946.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 
  0.725
EAR13197.1
COG0642 Signal transduction histidine kinase.
  
 
  0.694
EAR11964.1
Sensory transduction histidine kinase; COG2202 FOG: PAS/PAC domain.
   
 0.612
EAR12289.1
Hypothetical protein.
  
    0.588
EAR12777.1
Hypothetical protein.
  
     0.588
rpoC
DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
       0.581
EAR13990.1
Two-component hybrid sensor and regulator; COG0784 FOG: CheY-like receiver.
   
 0.550
EAR13991.1
COG0642 Signal transduction histidine kinase.
   
 0.550
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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