STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR12534.1Putative transmembrane HD family protein; COG1480 Predicted membrane-associated HD superfamily hydrolase. (687 aa)    
Predicted Functional Partners:
EAR12814.1
Hypothetical protein.
  
  
 0.755
EAR12298.1
Hypothetical protein.
 
     0.635
EAR12533.1
COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.583
dacA
Putative transmembrane protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
 
  
 0.540
EAR12532.1
Multi-domain protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
       0.517
EAR12239.1
COG0810 Periplasmic protein TonB, links inner and outer membranes.
  
     0.454
EAR13167.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
 
   0.453
EAR13683.1
Phosphate sodium symporter; COG0306 Phosphate/sulphate permeases.
  
     0.452
dnaX
DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
 
 
   0.419
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.