Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
speESpermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. (518 aa)    
Predicted Functional Partners:
EAR12552.1
COG3766 Predicted membrane protein.
 
     0.951
EAR12553.1
Putative lipoprotein.
 
     0.937
EAR12550.1
Spermidine synthase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.
    
  0.917
EAR12548.1
COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid).
 
     0.812
EAR12555.1
COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription.
 
     0.773
EAR12549.1
Cation channel family protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.
       0.768
EAR12556.1
Hypothetical protein; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
     0.728
EAR11556.1
COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.
     
  0.659
EAR13002.1
COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family.
     
  0.659
EAR12554.1
Hypothetical protein.
       0.634
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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