STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fabG3-ketoacyl-(acyl-carrier-protein) reductase. (310 aa)    
Predicted Functional Partners:
EAR12823.1
Hypothetical protein.
  
     0.539
EAR13561.1
Hypothetical protein.
  
     0.536
EAR11528.1
Hypothetical protein.
  
     0.516
EAR12560.1
Hypothetical protein.
       0.500
EAR12558.1
Hypothetical protein; COG1073 Hydrolases of the alpha/beta superfamily.
       0.461
EAR12716.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.455
EAR13389.1
Hypothetical protein; COG2234 Predicted aminopeptidases.
  
     0.433
EAR12960.1
Hypothetical protein; COG0735 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.
  
     0.433
EAR12966.1
Hypothetical protein; COG0735 Fe2+/Zn2+ uptake regulation proteins.
  
     0.421
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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