Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAR12605.1Hypothetical protein. (293 aa)    
Predicted Functional Partners:
EAR12835.1
4Fe-4S ferredoxin, iron-sulfur binding protein; COG1145 Ferredoxin.
    
   0.809
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.760
EAR13577.1
COG0236 Acyl carrier protein.
   
 
 0.760
EAR12322.1
Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
  
   0.750
EAR12844.1
Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
  
   0.750
EAR11597.1
Putative O-succinylbenzoate--CoA ligase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
 0.671
EAR13712.1
Hypothetical protein; COG0666 FOG: Ankyrin repeat.
    
 0.633
EAR13236.1
COG0633 Ferredoxin.
    
   0.575
EAR13819.1
Phenylacetate-CoA oxygenase/reductase, PaaK subunit; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
    
   0.575
EAR12636.1
Amino acid adenylation; COG0001 Glutamate-1-semialdehyde aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.572
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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