Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR12624.1Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein. (157 aa)    
Predicted Functional Partners:
EAR14020.1
Hypothetical protein.
  
     0.622
EAR12926.1
COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.585
EAR14025.1
Amidohydrolase family enzyme; COG1228 Imidazolonepropionase and related amidohydrolases.
  
     0.525
EAR12623.1
Hypothetical protein.
       0.499
EAR12840.1
Probable acrA1 protein; COG1087 UDP-glucose 4-epimerase.
  
     0.467
EAR11875.1
Hypothetical protein.
  
     0.463
EAR11473.1
Metal dependent amidohydrolase; COG0044 Dihydroorotase and related cyclic amidohydrolases.
  
     0.453
EAR12924.1
COG2311 Predicted membrane protein.
  
     0.440
EAR13767.1
COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs.
  
     0.438
EAR13220.1
Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.423
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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