STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR12641.1COG3210 Large exoproteins involved in heme utilization or adhesion. (637 aa)    
Predicted Functional Partners:
EAR12642.1
Hypothetical protein; COG5295 Autotransporter adhesin.
      0.649
EAR12643.1
Hypothetical protein.
 
    0.646
EAR12645.1
Hypothetical protein; COG2319 FOG: WD40 repeat.
 
    0.631
EAR12696.1
Putative competence-damage inducible; COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Belongs to the CinA family.
     
 0.604
EAR12288.1
Hypothetical protein; COG4992 Ornithine/acetylornithine aminotransferase.
  
   0.567
EAR11695.1
Hypothetical protein.
  
  
  0.537
EAR11845.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
  
 
   0.537
EAR12290.1
Hypothetical protein.
  
   0.525
EAR12289.1
Hypothetical protein.
  
   0.515
EAR13538.1
Putative outer membrane protein, probably involved in nutrient binding.
  
  0.496
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.