Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAR12656.1Putative protease; Degrades oligopeptides; Belongs to the peptidase S41B family. (1081 aa)    
Predicted Functional Partners:
EAR11960.1
COG0457 FOG: TPR repeat.
   
   0.745
EAR13113.1
COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases.
  
     0.597
EAR12657.1
Hypothetical protein; COG3565 Predicted dioxygenase of extradiol dioxygenase family.
       0.551
EAR12658.1
Gamma-glutamyltranspeptidase; COG0405 Gamma-glutamyltransferase.
    
  0.459
EAR13090.1
Secreted protein containing N-terminal zinc-dependent carboxypeptidase related domain; COG2866 Predicted carboxypeptidase.
  
     0.421
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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