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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR12656.1Putative protease; Degrades oligopeptides; Belongs to the peptidase S41B family. (1081 aa)    
Predicted Functional Partners:
EAR13113.1
COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases.
  
     0.597
EAR12657.1
Hypothetical protein; COG3565 Predicted dioxygenase of extradiol dioxygenase family.
       0.551
EAR12658.1
Gamma-glutamyltranspeptidase; COG0405 Gamma-glutamyltransferase.
    
  0.507
EAR12637.1
COG0342 Preprotein translocase subunit SecD.
  
   0.456
secF
Putative protein-export transmembrane SecDF protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
   
  0.447
EAR13090.1
Secreted protein containing N-terminal zinc-dependent carboxypeptidase related domain; COG2866 Predicted carboxypeptidase.
  
     0.421
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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