Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EAR12711.1COG1131 ABC-type multidrug transport system, ATPase component. (305 aa)    
Predicted Functional Partners:
EAR12180.1
Hypothetical protein; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
 0.947
EAR12159.1
Hypothetical protein; COG1271 Cytochrome bd-type quinol oxidase, subunit 1.
  
 0.712
EAR12710.1
Hypothetical protein.
       0.693
EAR12709.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
       0.508
EAR13875.1
COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit).
   
   0.497
atpD
ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
   0.476
EAR12708.1
Hypothetical protein.
       0.444
EAR13573.1
ABC transporter, ATPase subunit; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
  
  
 
0.441
EAR13155.1
ABC transporter, ATP-binding protein, MsbA family; COG1132 ABC-type multidrug transport system, ATPase and permease components.
    
  0.421
EAR12684.1
ABC transporter, ATP-binding protein, MsbA family; COG1132 ABC-type multidrug transport system, ATPase and permease components.
    
  0.421
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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