Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAR12731.1COG1984 Allophanate hydrolase subunit 2. (283 aa)    
Predicted Functional Partners:
EAR12730.1
COG2049 Allophanate hydrolase subunit 1.
 0.999
EAR12729.1
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
 0.998
EAR12229.1
Large subunit of NADH-dependent glutamate synthase; COG0067 Glutamate synthase domain 1.
   
 
  0.911
EAR12728.1
Mn2+/Fe2+ transporter, NRAMP family protein; COG1914 Mn2+ and Fe2+ transporters of the NRAMP family.
 
    0.908
EAR12727.1
Putative hydrolase; COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase.
       0.773
EAR12658.1
Gamma-glutamyltranspeptidase; COG0405 Gamma-glutamyltransferase.
     
  0.740
EAR12381.1
Transcriptional regulator, IclR family protein; COG1414 Transcriptional regulator.
  
    0.719
EAR13764.1
Acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 0.691
EAR11530.1
COG0174 Glutamine synthetase.
     
 0.661
glsA
COG2066 Glutaminase; Belongs to the glutaminase family.
     
  0.659
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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