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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR12742.1COG0006 Xaa-Pro aminopeptidase. (448 aa)    
Predicted Functional Partners:
EAR12743.1
Guanosine monophosphate synthetase GuaA; COG2818 3-methyladenine DNA glycosylase.
     
 0.775
EAR12744.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
       0.773
EAR12088.1
Hypothetical protein; COG2199 FOG: GGDEF domain.
  
     0.594
EAR12741.1
Hypothetical protein.
       0.544
EAR12701.1
Amidase; COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases.
  
 
   0.445
guaB
Putative inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
   0.442
EAR12477.1
Aminoacyl-histidine dipeptidase; COG2195 Di- and tripeptidases.
   
 
 0.432
EAR12885.1
Acylaminoacyl-peptidase; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases.
  
     0.432
pepT
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
   
 
 0.432
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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