STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR12753.1Putative 22-domain light- and oxygen-sensing histidine kinase; COG2202 FOG: PAS/PAC domain. (187 aa)    
Predicted Functional Partners:
EAR12891.1
FixL-related histidine kinase; COG2202 FOG: PAS/PAC domain.
  
 0.955
EAR12648.1
Sensory transduction histidine kinase; COG0784 FOG: CheY-like receiver.
  
 0.932
EAR13293.1
Sensory box sensor histidine kinase; COG0784 FOG: CheY-like receiver.
   
 0.695
EAR13990.1
Two-component hybrid sensor and regulator; COG0784 FOG: CheY-like receiver.
   
 0.615
ribB
Putative riboflavin biosynthesis protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
 0.573
EAR12754.1
Hypothetical protein.
       0.570
EAR12513.1
Long-chain acyl-CoA thioester hydrolase family protein; COG1607 Acyl-CoA hydrolase.
      0.563
EAR11984.1
Hypothetical protein; COG2203 FOG: GAF domain.
   
 0.546
EAR11965.1
Two-component response regulator; COG0784 FOG: CheY-like receiver.
   
  0.540
EAR12752.1
COG0500 SAM-dependent methyltransferases.
       0.463
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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