Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAR12756.1Secreted protein containing N-terminal zinc-dependent carboxypeptidase-related domain, putative; COG4886 Leucine-rich repeat (LRR) protein. (830 aa)    
Predicted Functional Partners:
EAR12088.1
Hypothetical protein; COG2199 FOG: GGDEF domain.
  
     0.649
EAR13072.1
Hypothetical protein.
  
     0.492
bshC
COG4365 Uncharacterized protein conserved in bacteria; Belongs to the BshC family.
       0.491
EAR13224.1
Hypothetical protein.
  
     0.476
EAR12748.1
glutaryl-7-ACA acylase precursor; COG2936 Predicted acyl esterases.
 
     0.455
EAR13007.1
Hypothetical protein; COG0406 Fructose-2,6-bisphosphatase.
  
     0.452
EAR11914.1
Hypothetical protein; COG0823 Periplasmic component of the Tol biopolymer transport system.
  
     0.433
EAR12885.1
Acylaminoacyl-peptidase; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases.
  
     0.428
EAR13225.1
Putative outer membrane protein probably involved in nutrient binding; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.421
EAR11623.1
Xaa-Pro dipeptidase family enzyme; COG1228 Imidazolonepropionase and related amidohydrolases.
  
     0.418
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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