STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR12812.1Hypothetical protein. (154 aa)    
Predicted Functional Partners:
EAR12813.1
COG1862 Preprotein translocase subunit YajC.
       0.818
EAR12811.1
Putative N utilization substance protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
       0.738
EAR13186.1
Hypothetical protein.
  
     0.597
EAR13515.1
Hypothetical protein; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily.
  
     0.580
EAR12814.1
Hypothetical protein.
       0.551
coaE
Putative dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
       0.551
EAR12809.1
ABC transporter, ATP-binding protein, MDR family; COG1132 ABC-type multidrug transport system, ATPase and permease components.
       0.507
EAR12816.1
Two-component regulatory system, sensor kinase protein; COG0642 Signal transduction histidine kinase.
 
     0.494
EAR12674.1
Hypothetical protein.
 
     0.489
EAR12817.1
Two-component system, transcriptional regulatory protein; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
     0.476
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.