Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAR12821.1Hypothetical protein; COG1466 DNA polymerase III, delta subunit. (333 aa)    
Predicted Functional Partners:
EAR12715.1
COG2176 DNA polymerase III, alpha subunit (gram-positive type).
  
 0.993
EAR12663.1
DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...]
  
 
 0.992
dnaX
DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
 
 
 0.987
EAR13807.1
Putative DNA polymerase III, delta subunit; COG0470 ATPase involved in DNA replication.
 
 
 0.986
EAR11493.1
COG0587 DNA polymerase III, alpha subunit.
   
 0.954
EAR12456.1
COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
    
 0.927
EAR13279.1
COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
    
 0.918
EAR12829.1
COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
 
  
 0.897
EAR12820.1
Hypothetical protein.
 
     0.787
EAR12819.1
COG1216 Predicted glycosyltransferases.
 
     0.654
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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