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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR12821.1Hypothetical protein; COG1466 DNA polymerase III, delta subunit. (333 aa)    
Predicted Functional Partners:
EAR12663.1
DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...]
  
 
 0.999
EAR12715.1
COG2176 DNA polymerase III, alpha subunit (gram-positive type).
  
 0.999
dnaX
DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
 
 
 0.987
EAR13807.1
Putative DNA polymerase III, delta subunit; COG0470 ATPase involved in DNA replication.
 
 
 0.986
EAR11493.1
COG0587 DNA polymerase III, alpha subunit.
   
 0.965
EAR12456.1
COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
    
 0.936
EAR13279.1
COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
    
 0.915
EAR12829.1
COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
 
  
 0.896
EAR12820.1
Hypothetical protein.
 
     0.795
EAR12819.1
COG1216 Predicted glycosyltransferases.
 
     0.633
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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