STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR12841.1Aminomethyltransferase. (46 aa)    
Predicted Functional Partners:
EAR12840.1
Probable acrA1 protein; COG1087 UDP-glucose 4-epimerase.
       0.773
EAR12839.1
Integral membrane protein; COG1988 Predicted membrane-bound metal-dependent hydrolases.
       0.727
EAR12838.1
Hypothetical protein.
       0.689
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
       0.661
EAR12843.1
COG0006 Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family.
       0.462
EAR12844.1
Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
       0.462
EAR12845.1
Hypothetical protein.
       0.462
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.