Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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co-expression
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gene co-occurrence
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EAR12848.1Putative RNA binding protein with S1 RNA-binding domain; COG2183 Transcriptional accessory protein. (684 aa)    
Predicted Functional Partners:
rpoA
DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.839
rpoB
DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.836
EAR12154.1
Hypothetical protein; COG0251 Putative translation initiation inhibitor, yjgF family.
    
  0.810
EAR12847.1
DNA topoisomerase III; COG0550 Topoisomerase IA.
  
    0.590
EAR12849.1
Zinc-containing alcohol dehydrogenase superfamily protein; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
   
   0.511
EAR11719.1
TPR-domain containing protein; COG0457 FOG: TPR repeat.
   
  0.482
EAR11747.1
Hypothetical protein; COG0457 FOG: TPR repeat.
    
  0.480
EAR13418.1
Aerotolerance-related exported protein; COG0457 FOG: TPR repeat.
    
  0.480
EAR13420.1
Aerotolerance-related exported protein; COG0457 FOG: TPR repeat.
    
  0.480
EAR13558.1
TPR domain protein; COG0457 FOG: TPR repeat.
    
  0.480
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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