Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR12860.1COG4206 Outer membrane cobalamin receptor protein. (623 aa)    
Predicted Functional Partners:
EAR12861.1
Cell surface protein.
 
 
   0.977
EAR12859.1
Probable ABC transporter (substrate-binding protein); COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
     0.482
EAR13592.1
Secretion protein HlyD; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.467
EAR11961.1
Hypothetical protein.
  
 
   0.466
EAR13591.1
Hypothetical protein; COG1510 Predicted transcriptional regulators.
  
     0.457
EAR11954.1
Hypothetical protein; COG5617 Predicted integral membrane protein.
  
     0.443
EAR11957.1
COG0438 Glycosyltransferase.
  
     0.442
EAR13595.1
COG1538 Outer membrane protein.
  
     0.437
EAR11958.1
Capsular polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.436
EAR12146.1
Putative outer membrane protein probably involved in nutrient binding.
  
 
   0.435
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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