STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR12886.1Hypothetical protein; COG0151 Phosphoribosylamine-glycine ligase. (394 aa)    
Predicted Functional Partners:
EAR12461.1
Hypothetical protein.
 
     0.786
EAR13621.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
     0.774
EAR12792.1
Hypothetical protein.
  
     0.772
EAR11936.1
Hypothetical protein.
  
     0.771
EAR13638.1
Tetratricopeptide repeat domain protein; COG0457 FOG: TPR repeat.
  
     0.770
EAR13231.1
Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
  
     0.768
EAR11946.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
     0.589
EAR12885.1
Acylaminoacyl-peptidase; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases.
       0.543
EAR12184.1
Hypothetical protein; COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon).
  
     0.520
EAR12887.1
COG3959 Transketolase, N-terminal subunit.
       0.491
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.