STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR12903.1COG1398 Fatty-acid desaturase. (246 aa)    
Predicted Functional Partners:
EAR12904.1
COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
 
     0.871
EAR13819.1
Phenylacetate-CoA oxygenase/reductase, PaaK subunit; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
     
 0.704
EAR12636.1
Amino acid adenylation; COG0001 Glutamate-1-semialdehyde aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 
 0.696
EAR13038.1
Methyltransferase small:Ribosomal L11 methyltransferase; COG2890 Methylase of polypeptide chain release factors; Belongs to the methyltransferase superfamily.
  
     0.629
EAR11757.1
COG3239 Fatty acid desaturase.
   
 0.564
EAR12328.1
Hypothetical protein; COG2214 DnaJ-class molecular chaperone.
  
 
   0.533
EAR11880.1
Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.507
EAR12914.1
Alcohol dehydrogenase, zinc-containing; COG1064 Zn-dependent alcohol dehydrogenases.
    
  0.450
EAR12568.1
3-ketoacyl-(acyl-carrier-protein) reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.427
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.