Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR12905.1COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. (302 aa)    
Predicted Functional Partners:
EAR12932.1
Hypothetical protein.
  
     0.590
EAR13591.1
Hypothetical protein; COG1510 Predicted transcriptional regulators.
  
     0.558
EAR11958.1
Capsular polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
  
    0.554
EAR13252.1
Hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
  
    0.552
EAR11960.1
COG0457 FOG: TPR repeat.
  
     0.543
EAR12861.1
Cell surface protein.
  
     0.521
EAR11956.1
Hypothetical protein; COG3934 Endo-beta-mannanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.518
EAR12904.1
COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
       0.513
EAR11954.1
Hypothetical protein; COG5617 Predicted integral membrane protein.
  
     0.501
EAR12906.1
ThiJ/PfpI family protein; COG0693 Putative intracellular protease/amidase.
       0.463
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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