STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR12967.1Hypothetical protein; COG0772 Bacterial cell division membrane protein. (134 aa)    
Predicted Functional Partners:
EAR12973.1
Hypothetical protein.
 
     0.922
EAR12972.1
Permease; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
     0.905
EAR12966.1
Hypothetical protein; COG0735 Fe2+/Zn2+ uptake regulation proteins.
 
     0.888
EAR12971.1
ABC transporter ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
     0.875
folE-4
COG0302 GTP cyclohydrolase I.
       0.773
EAR12969.1
Hypothetical protein; COG3211 Predicted phosphatase.
       0.773
EAR12960.1
Hypothetical protein; COG0735 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.
 
     0.761
EAR12970.1
Putative nitrile hydratase activator-like regulatory protein; COG0523 Putative GTPases (G3E family).
       0.738
EAR12962.1
Hypothetical protein; COG0302 GTP cyclohydrolase I.
  
     0.688
EAR12974.1
UDP-sugar hydrolase; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases.
       0.601
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.