Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAR12969.1Hypothetical protein; COG3211 Predicted phosphatase. (560 aa)    
Predicted Functional Partners:
EAR12970.1
Putative nitrile hydratase activator-like regulatory protein; COG0523 Putative GTPases (G3E family).
 
     0.781
EAR12972.1
Permease; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
     0.780
EAR12967.1
Hypothetical protein; COG0772 Bacterial cell division membrane protein.
       0.773
folE-4
COG0302 GTP cyclohydrolase I.
       0.773
EAR12971.1
ABC transporter ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
     0.767
EAR12973.1
Hypothetical protein.
 
     0.765
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.
   
 
  0.713
EAR12974.1
UDP-sugar hydrolase; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases.
     
 0.624
EAR12975.1
COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; Belongs to the 5'-nucleotidase family.
     
 0.624
EAR12966.1
Hypothetical protein; COG0735 Fe2+/Zn2+ uptake regulation proteins.
       0.538
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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