Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR12971.1ABC transporter ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component. (225 aa)    
Predicted Functional Partners:
EAR12972.1
Permease; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
 0.982
EAR11925.1
Putative ABC transporter, ATP-binding protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
 0.966
EAR11926.1
Putative ABC transporter; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
 0.960
EAR12973.1
Hypothetical protein.
 
    0.948
EAR12967.1
Hypothetical protein; COG0772 Bacterial cell division membrane protein.
 
     0.875
EAR12970.1
Putative nitrile hydratase activator-like regulatory protein; COG0523 Putative GTPases (G3E family).
  
  
 0.777
EAR12969.1
Hypothetical protein; COG3211 Predicted phosphatase.
 
     0.767
folE-4
COG0302 GTP cyclohydrolase I.
       0.732
EAR13877.1
COG4591 ABC-type transport system, involved in lipoprotein release, permease component.
  
 0.723
EAR12764.1
COG4591 ABC-type transport system, involved in lipoprotein release, permease component.
  
 0.723
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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