Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR12984.1COG0589 Universal stress protein UspA and related nucleotide-binding proteins. (285 aa)    
Predicted Functional Partners:
EAR12986.1
Hypothetical protein.
 
     0.907
EAR12985.1
COG1292 Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family.
 
     0.867
EAR12643.1
Hypothetical protein.
  
     0.658
EAR12645.1
Hypothetical protein; COG2319 FOG: WD40 repeat.
  
     0.622
EAR13426.1
COG0288 Carbonic anhydrase.
  
     0.483
EAR13193.1
COG1238 Predicted membrane protein.
  
     0.458
EAR12404.1
Phosphatidylserine decarboxylase; COG4281 Acyl-CoA-binding protein.
  
     0.410
EAR12449.1
Hypothetical protein.
  
     0.400
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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