Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAR13041.1COG0477 Permeases of the major facilitator superfamily. (417 aa)    
Predicted Functional Partners:
EAR13040.1
FAD linked oxidase-like protein; COG0277 FAD/FMN-containing dehydrogenases.
     
 0.824
EAR13042.1
Putative ion channel protein; COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
       0.774
EAR11698.1
Hypothetical protein.
  
     0.694
EAR11697.1
Hypothetical protein.
  
     0.664
EAR11695.1
Hypothetical protein.
  
     0.487
EAR11910.1
HlyB/MsbA family ABC transporter; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
  
  
 0.467
EAR13039.1
Hypothetical protein.
       0.465
EAR12945.1
Integral membrane transporter; COG0477 Permeases of the major facilitator superfamily.
     
 0.430
EAR11912.1
COG1538 Outer membrane protein.
  
     0.418
EAR13158.1
Histidine kinase sensor protein; COG0457 FOG: TPR repeat.
 
  
  0.413
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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