STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR13043.1COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase. (272 aa)    
Predicted Functional Partners:
EAR13044.1
Hydrolase, NUDIX family protein; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
 
     0.737
EAR13178.1
Hypothetical protein; COG1577 Mevalonate kinase.
  
 
   0.703
EAR13062.1
Hypothetical protein.
  
     0.672
EAR13432.1
Hypothetical protein.
  
     0.655
EAR12406.1
Phosphatidate cytidylyltransferase; CDP-diglyceride synthase; COG0575 CDP-diglyceride synthetase.
    
 0.629
mraW
S-adenosyl-methyltransferase MraW.
  
     0.625
EAR13177.1
Hypothetical protein; COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases.
 
   
 0.598
EAR12784.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
  
     0.570
secE
Hypothetical protein; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.562
EAR13871.1
COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains).
 
     0.556
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.