Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR13071.1Hypothetical protein. (248 aa)    
Predicted Functional Partners:
EAR12239.1
COG0810 Periplasmic protein TonB, links inner and outer membranes.
  
  0.821
EAR12991.1
Hypothetical protein; COG4667 Predicted esterase of the alpha-beta hydrolase superfamily.
  
     0.762
EAR13888.1
Hypothetical protein.
  
     0.755
EAR11745.1
Hypothetical protein.
  
     0.754
EAR12443.1
Thiol:disulfide interchange protein.
  
     0.751
EAR13508.1
Hypothetical protein.
  
     0.741
EAR13319.1
Hypothetical protein; COG3577 Predicted aspartyl protease.
  
     0.717
EAR11966.1
Hypothetical protein.
  
     0.707
EAR11558.1
lysM domain protein.
  
     0.696
EAR12014.1
Hypothetical protein.
  
     0.685
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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