Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR11907.1COG1629 Outer membrane receptor proteins, mostly Fe transport. (840 aa)    
Predicted Functional Partners:
EAR12135.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
  0.555
EAR11908.1
COG1278 Cold shock proteins.
 
     0.543
EAR12239.1
COG0810 Periplasmic protein TonB, links inner and outer membranes.
   
   0.521
EAR13925.1
Putative anti-sigma factor; COG3712 Fe2+-dicitrate sensor, membrane component.
  
    0.459
EAR13728.1
Hypothetical protein.
  
     0.448
EAR13924.1
Putative outer membrane protein probably involved in nutrient binding; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
  0.430
EAR12854.1
Hypothetical protein.
  
     0.411
EAR11671.1
Putative outer membrane protein, probably involved in nutrient binding; COG4206 Outer membrane cobalamin receptor protein.
  
  
  0.408
EAR12147.1
Putative outer membrane protein, probably involved in nutrient binding; COG4771 Outer membrane receptor for ferrienterochelin and colicins.
     
  0.405
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.