Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAR11926.1Putative ABC transporter; COG0577 ABC-type antimicrobial peptide transport system, permease component. (410 aa)    
Predicted Functional Partners:
EAR11927.1
ABC transporter, ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 0.998
lolD
Lipoprotein releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 0.975
EAR11924.1
Putative transport/efflux component protein; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.965
EAR12971.1
ABC transporter ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
 0.960
EAR11718.1
COG2884 Predicted ATPase involved in cell division.
 
   
 0.917
EAR11925.1
Putative ABC transporter, ATP-binding protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
    
0.811
EAR13504.1
COG1538 Outer membrane protein.
 
 
 
 0.779
EAR11911.1
COG0845 Membrane-fusion protein.
  
  
 0.711
EAR12895.1
COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog).
   
    0.582
EAR13734.1
Efflux transporter, RND family, MFP subunit; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.548
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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