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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR11995.1COG0739 Membrane proteins related to metalloendopeptidases. (564 aa)    
Predicted Functional Partners:
EAR11996.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
       0.666
recO
DNA repair protein; Involved in DNA repair and RecF pathway recombination.
 
     0.647
EAR14002.1
Putative transmembrane peptidase; COG0739 Membrane proteins related to metalloendopeptidases.
  
     0.617
EAR11993.1
Hypothetical protein.
       0.563
EAR11994.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
       0.553
EAR13776.1
Putative membrane peptidase; COG0739 Membrane proteins related to metalloendopeptidases.
  
     0.531
EAR13794.1
Peptidase, M23/M37 family protein; COG0739 Membrane proteins related to metalloendopeptidases.
  
     0.517
rny
Hypothetical protein; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.
   
   0.509
EAR13797.1
Hypothetical protein.
  
     0.489
EAR11613.1
Hypothetical protein.
  
     0.484
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.