Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAR12103.1Ribonuclease BN; COG1295 Predicted membrane protein. (313 aa)    
Predicted Functional Partners:
EAR12105.1
Hypothetical protein; COG1357 Uncharacterized low-complexity proteins.
     
 0.649
EAR12104.1
Hypothetical protein; COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component.
       0.648
EAR12106.1
COG0157 Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family.
       0.635
EAR12107.1
Hypothetical protein.
       0.555
hisS
COG0124 Histidyl-tRNA synthetase.
       0.533
rlmH
Hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
       0.518
EAR12116.1
Sodium/hydrogen exchanger family protein; COG0025 NhaP-type Na+/H+ and K+/H+ antiporters; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
   
 0.453
EAR12407.1
Hypothetical protein.
  
     0.428
EAR11633.1
DdaH family protein; COG1834 N-Dimethylarginine dimethylaminohydrolase.
   
    0.426
priA
Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
 
     0.411
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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