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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR12130.1Glycosyl hydrolase, family 16; COG2273 Beta-glucanase/Beta-glucan synthetase. (268 aa)    
Predicted Functional Partners:
EAR12129.1
Glycosyl hydrolase, family 3; COG1472 Beta-glucosidase-related glycosidases.
 
 
  0.862
EAR12132.1
Probable glycosyl hydrolase; COG2730 Endoglucanase.
 
  
 0.854
EAR12134.1
Putative outer membrane protein; COG0457 FOG: TPR repeat.
 
     0.783
EAR12135.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
     0.763
EAR12128.1
COG5520 O-Glycosyl hydrolase; Belongs to the glycosyl hydrolase 30 family.
 
   
 0.755
EAR12141.1
Hypothetical protein.
 
  
  0.704
EAR12127.1
Sugar transporter subfamily protein; COG0477 Permeases of the major facilitator superfamily; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
 
     0.693
EAR12136.1
Hypothetical protein; COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin.
  
     0.674
EAR12131.1
Hypothetical protein.
 
     0.647
EAR12142.1
Hypothetical protein.
 
     0.568
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.