Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAR12138.1Hypothetical protein; COG0457 FOG: TPR repeat. (185 aa)    
Predicted Functional Partners:
EAR13079.1
COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family.
    
  0.795
EAR12023.1
COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family.
    
  0.795
EAR12891.1
FixL-related histidine kinase; COG2202 FOG: PAS/PAC domain.
   
 0.687
EAR12648.1
Sensory transduction histidine kinase; COG0784 FOG: CheY-like receiver.
   
 0.667
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
    
  0.543
EAR12425.1
Heat shock protein 90; COG0326 Molecular chaperone, HSP90 family.
   
  0.538
EAR13712.1
Hypothetical protein; COG0666 FOG: Ankyrin repeat.
    
  0.536
EAR13393.1
Putative helicase; COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member.
  
   0.533
EAR13879.1
GTP-binding protein LepA; COG5126 Ca2+-binding protein (EF-Hand superfamily).
    
  0.532
rpoA
DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.530
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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