Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR12141.1Hypothetical protein. (1152 aa)    
Predicted Functional Partners:
EAR12140.1
Hypothetical protein; COG5309 Exo-beta-1,3-glucanase.
 
     0.940
EAR12142.1
Hypothetical protein.
 
     0.902
EAR12139.1
Hypothetical protein; COG2211 Na+/melibiose symporter and related transporters.
 
     0.878
EAR12143.1
Laminarinase; COG2273 Beta-glucanase/Beta-glucan synthetase.
 
  
  0.691
EAR12130.1
Glycosyl hydrolase, family 16; COG2273 Beta-glucanase/Beta-glucan synthetase.
 
  
  0.683
EAR11515.1
COG2273 Beta-glucanase/Beta-glucan synthetase.
 
  
  0.650
EAR12148.1
Hypothetical protein; COG3292 Predicted periplasmic ligand-binding sensor domain.
 
     0.630
EAR12132.1
Probable glycosyl hydrolase; COG2730 Endoglucanase.
 
  
 0.614
EAR12136.1
Hypothetical protein; COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin.
  
     0.607
EAR12128.1
COG5520 O-Glycosyl hydrolase; Belongs to the glycosyl hydrolase 30 family.
 
     0.571
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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