Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR12145.1Hypothetical protein; COG0516 IMP dehydrogenase/GMP reductase. (490 aa)    
Predicted Functional Partners:
EAR12146.1
Putative outer membrane protein probably involved in nutrient binding.
 
  
  0.893
EAR12147.1
Putative outer membrane protein, probably involved in nutrient binding; COG4771 Outer membrane receptor for ferrienterochelin and colicins.
 
     0.837
EAR12148.1
Hypothetical protein; COG3292 Predicted periplasmic ligand-binding sensor domain.
 
     0.739
EAR12142.1
Hypothetical protein.
 
    0.641
EAR12143.1
Laminarinase; COG2273 Beta-glucanase/Beta-glucan synthetase.
 
     0.603
EAR12141.1
Hypothetical protein.
 
  
  0.563
EAR13494.1
Glutamate--cysteine ligase, GCS2.
  
     0.543
EAR13493.1
Hypothetical protein; COG3931 Predicted N-formylglutamate amidohydrolase.
  
     0.540
EAR12144.1
Glycosyl hydrolase, family 16.
     
 0.539
EAR12136.1
Hypothetical protein; COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin.
  
     0.537
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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