STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFU67301.1Antitoxin transcriptional regulator of toxin/antitoxin module HipB-like protein. (85 aa)    
Predicted Functional Partners:
AFU67302.1
Toxin/antitoxin module HipA-like protein.
 
   0.961
AFU67303.1
Serine kinase toxin of HipAB toxin-antitoxin module.
 
   0.961
AFU69949.1
Addiction module toxin protein, zeta toxin-like protein.
  
 
 0.610
AFU68891.1
Thiol-disulfide oxidoreductase, thioredoxin superfamily.
  
     0.483
cas9
CRISPR-associated protein Cas9/Csn1, subtype II; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans- encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) [...]
  
     0.470
AFU67867.1
Addiction module toxin protein HipA.
 
   0.458
AFU67546.1
Hypothetical protein.
  
     0.418
Your Current Organism:
Psychroflexus torquis
NCBI taxonomy Id: 313595
Other names: P. torquis ATCC 700755, Psychroflexus torquis ACAM 623, Psychroflexus torquis ATCC 700755, Psychroflexus torquis str. ATCC 700755, Psychroflexus torquis strain ATCC 700755
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