STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFU67570.1Oxidoreductase-like enzyme, Gfo/Idh/MocA family. (321 aa)    
Predicted Functional Partners:
AFU70197.1
Lipopolysaccharide sugar aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.882
AFU67571.1
3-hydroxybutyryl-CoA dehydrogenase FadB.
 
    0.812
AFU68492.1
dTDP-6-deoxy-D-xylo-hex-3-ulose transaminase FdtC; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.807
AFU67572.1
DUF1015 superfamily protein.
 
     0.801
AFU68548.1
lipid-A-disaccharide synthase LpxB; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
     0.777
AFU67573.1
Pyridoxal phosphate-dependent enzyme, YggS family; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
       0.728
AFU68660.1
AP endonuclease family 2 protein.
  
  
 0.641
AFU68663.1
AP endonuclease family 2 protein.
  
  
 0.641
lysS
lysyl-tRNA synthetase (class II) LysS; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.616
AFU70446.1
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase LpxD; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
 
     0.593
Your Current Organism:
Psychroflexus torquis
NCBI taxonomy Id: 313595
Other names: P. torquis ATCC 700755, Psychroflexus torquis ACAM 623, Psychroflexus torquis ATCC 700755, Psychroflexus torquis str. ATCC 700755, Psychroflexus torquis strain ATCC 700755
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