Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFU67762.1 | AFU67763.1 | P700755_000759 | P700755_000760 | Large alpha-helical outer membrane protein; COG2373 superfamily protein. | Peptidoglycan transpeptidase-transglycosylase PbpC. | 0.921 |
AFU67762.1 | AFU70086.1 | P700755_000759 | P700755_003459 | Large alpha-helical outer membrane protein; COG2373 superfamily protein. | vWFA superfamily protein. | 0.543 |
AFU67762.1 | AFU70088.1 | P700755_000759 | P700755_003461 | Large alpha-helical outer membrane protein; COG2373 superfamily protein. | DUF4350 superfamily protein. | 0.533 |
AFU67762.1 | AFU70089.1 | P700755_000759 | P700755_003462 | Large alpha-helical outer membrane protein; COG2373 superfamily protein. | Hypothetical protein. | 0.462 |
AFU67762.1 | AFU70091.1 | P700755_000759 | P700755_003464 | Large alpha-helical outer membrane protein; COG2373 superfamily protein. | DUF95 superfamily protein. | 0.577 |
AFU67763.1 | AFU67762.1 | P700755_000760 | P700755_000759 | Peptidoglycan transpeptidase-transglycosylase PbpC. | Large alpha-helical outer membrane protein; COG2373 superfamily protein. | 0.921 |
AFU67763.1 | AFU68255.1 | P700755_000760 | P700755_001322 | Peptidoglycan transpeptidase-transglycosylase PbpC. | Peptidoglycan transglycosylase/transpeptidase (penicillin binding protein 1a) McrA. | 0.915 |
AFU67763.1 | AFU70086.1 | P700755_000760 | P700755_003459 | Peptidoglycan transpeptidase-transglycosylase PbpC. | vWFA superfamily protein. | 0.493 |
AFU67763.1 | AFU70088.1 | P700755_000760 | P700755_003461 | Peptidoglycan transpeptidase-transglycosylase PbpC. | DUF4350 superfamily protein. | 0.451 |
AFU67763.1 | AFU70089.1 | P700755_000760 | P700755_003462 | Peptidoglycan transpeptidase-transglycosylase PbpC. | Hypothetical protein. | 0.416 |
AFU67763.1 | AFU70091.1 | P700755_000760 | P700755_003464 | Peptidoglycan transpeptidase-transglycosylase PbpC. | DUF95 superfamily protein. | 0.435 |
AFU67763.1 | AFU70404.1 | P700755_000760 | P700755_003830 | Peptidoglycan transpeptidase-transglycosylase PbpC. | Multimodular murein transpeptidase-transglycosylase. | 0.917 |
AFU68255.1 | AFU67763.1 | P700755_001322 | P700755_000760 | Peptidoglycan transglycosylase/transpeptidase (penicillin binding protein 1a) McrA. | Peptidoglycan transpeptidase-transglycosylase PbpC. | 0.915 |
AFU68255.1 | AFU70404.1 | P700755_001322 | P700755_003830 | Peptidoglycan transglycosylase/transpeptidase (penicillin binding protein 1a) McrA. | Multimodular murein transpeptidase-transglycosylase. | 0.919 |
AFU70086.1 | AFU67762.1 | P700755_003459 | P700755_000759 | vWFA superfamily protein. | Large alpha-helical outer membrane protein; COG2373 superfamily protein. | 0.543 |
AFU70086.1 | AFU67763.1 | P700755_003459 | P700755_000760 | vWFA superfamily protein. | Peptidoglycan transpeptidase-transglycosylase PbpC. | 0.493 |
AFU70086.1 | AFU70088.1 | P700755_003459 | P700755_003461 | vWFA superfamily protein. | DUF4350 superfamily protein. | 0.953 |
AFU70086.1 | AFU70089.1 | P700755_003459 | P700755_003462 | vWFA superfamily protein. | Hypothetical protein. | 0.952 |
AFU70086.1 | AFU70091.1 | P700755_003459 | P700755_003464 | vWFA superfamily protein. | DUF95 superfamily protein. | 0.957 |
AFU70088.1 | AFU67762.1 | P700755_003461 | P700755_000759 | DUF4350 superfamily protein. | Large alpha-helical outer membrane protein; COG2373 superfamily protein. | 0.533 |
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