STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFU67838.1DUF4289 superfamily protein. (655 aa)    
Predicted Functional Partners:
AFU67156.1
Outer membrane protein, Bac_surface_Ag superfamily protein.
  
   
 0.673
AFU67389.1
Hypothetical protein.
  
     0.673
AFU67671.1
Hypothetical protein; DUF4369 superfamily domain present.
  
     0.672
AFU67836.1
Hypothetical protein.
 
     0.672
AFU67943.1
Gliding motility associated protein GldM.
  
     0.658
AFU69220.1
TonB-dependent outer membrane porin.
  
     0.656
AFU67197.1
phenol_MetA_deg superfamily protein.
  
     0.651
AFU70083.1
CNA_B domain containing protein.
  
     0.646
AFU68196.1
Periplasmic transport protein.
 
 
 
 0.641
AFU69914.1
Hypothetical protein.
  
     0.627
Your Current Organism:
Psychroflexus torquis
NCBI taxonomy Id: 313595
Other names: P. torquis ATCC 700755, Psychroflexus torquis ACAM 623, Psychroflexus torquis ATCC 700755, Psychroflexus torquis str. ATCC 700755, Psychroflexus torquis strain ATCC 700755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.