STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFU67868.1Addiction module antitoxin transcriptional regulator. (84 aa)    
Predicted Functional Partners:
AFU69073.1
Rod shape-determining protein MreB.
  
 
 0.981
AFU67867.1
Addiction module toxin protein HipA.
 
     0.910
AFU70151.1
Toxin of toxin-antitoxin module, HipA family.
 
     0.618
rplW
LSU ribosomal protein L23p (L23Ae) RplW; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.
    
 
 0.586
rpmC
LSU ribosomal protein L29p (L35e) RpmC; Belongs to the universal ribosomal protein uL29 family.
    
   0.579
rplV
LSU ribosomal protein L22p (L17e) RplV; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.
    
   0.579
AFU69364.1
Molybdopterin and nucleic-acid binding protein; Similar to competence damage-inducible protein CinA; Belongs to the CinA family.
  
    0.526
AFU67306.1
Hypothetical protein.
  
   0.517
secA
Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.
  
   0.517
AFU67907.1
Addiction module toxin protein HipA.
 
     0.506
Your Current Organism:
Psychroflexus torquis
NCBI taxonomy Id: 313595
Other names: P. torquis ATCC 700755, Psychroflexus torquis ACAM 623, Psychroflexus torquis ATCC 700755, Psychroflexus torquis str. ATCC 700755, Psychroflexus torquis strain ATCC 700755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.