STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFU67878.1Transcriptional regulator with an ATP-binding domain. (547 aa)    
Predicted Functional Partners:
AFU69662.1
ATP binding protein with AAA and HATPase domains.
  
  
  0.968
AFU69555.1
ATP binding protein with AAA and HATPase domains.
  
  
 
0.929
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
     
  0.900
AFU67879.1
Hypothetical protein.
       0.746
AFU67880.1
Retron-type reverse transcriptase.
       0.694
AFU68884.1
ATP-binding protein, P-loop_NTPAse superfamily.
  
     0.521
AFU67881.1
Hypothetical protein.
       0.518
AFU70514.1
DUF2971 superfamily protein.
  
     0.505
AFU69586.1
Transposase, IS4 family.
  
     0.441
AFU68509.1
ATP-binding protein, P-loop_NTPAse superfamily.
  
     0.410
Your Current Organism:
Psychroflexus torquis
NCBI taxonomy Id: 313595
Other names: P. torquis ATCC 700755, Psychroflexus torquis ACAM 623, Psychroflexus torquis ATCC 700755, Psychroflexus torquis str. ATCC 700755, Psychroflexus torquis strain ATCC 700755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.