STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFU68207.1DUF4301 superfamily protein. (514 aa)    
Predicted Functional Partners:
AFU68206.1
Nicotinamide mononucleotide adenylyltransferase NadR.
      0.981
AFU68205.1
Nicotinamide mononucleotide transporter PnuC-like protein.
     
 0.836
AFU68208.1
Peptide release factor PrfH.
       0.802
AFU68204.1
DUF77 superfamily protein.
       0.657
AFU69596.1
Outer membrane protein transport protein, OMPP1/FadL/TodX family.
  
     0.651
AFU67197.1
phenol_MetA_deg superfamily protein.
  
     0.584
AFU70473.1
Acetyltransferase, putative.
 
     0.575
cobB
NAD-dependent protein deacetylase, SIR2 family; Belongs to the sirtuin family. Class III subfamily.
   
    0.558
AFU69616.1
ATP-dependent exoDNAse (exonuclease V) RecD-like protein.
  
     0.504
AFU70430.1
Hypothetical protein.
  
     0.489
Your Current Organism:
Psychroflexus torquis
NCBI taxonomy Id: 313595
Other names: P. torquis ATCC 700755, Psychroflexus torquis ACAM 623, Psychroflexus torquis ATCC 700755, Psychroflexus torquis str. ATCC 700755, Psychroflexus torquis strain ATCC 700755
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