STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFU68562.1Membrane protein, BatI aerotolerance operon protein BatD. (585 aa)    
Predicted Functional Partners:
AFU68561.1
TPR domain protein, BatI aerotolerance operon protein BatE.
  
 0.995
AFU68564.1
TPR domain protein, BatI aerotolerance operon protein BatB.
   
 0.976
AFU68565.1
vWFA domain protein, BatI aerotolerance operon protein BatA.
  
 0.975
AFU68563.1
TPR domain protein, BatI aerotolerance operon protein BatC.
     0.961
AFU68567.1
Protein with a vWFA domain.
 
  
 0.960
AFU68566.1
Hypothetical protein.
 
   
 0.959
AFU68568.1
ATP-binding protein, P-loop_NTPase superfamily.
 
   
 0.759
AFU68736.1
Hypothetical protein.
  
     0.688
AFU67671.1
Hypothetical protein; DUF4369 superfamily domain present.
  
     0.629
AFU68560.1
Hypothetical protein.
       0.628
Your Current Organism:
Psychroflexus torquis
NCBI taxonomy Id: 313595
Other names: P. torquis ATCC 700755, Psychroflexus torquis ACAM 623, Psychroflexus torquis ATCC 700755, Psychroflexus torquis str. ATCC 700755, Psychroflexus torquis strain ATCC 700755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.