STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFU68580.1Outer membrane protein with a CnaB-type domain. (957 aa)    
Predicted Functional Partners:
AFU68579.1
Hypothetical protein.
 
     0.949
AFU68581.1
Deoxyribonuclease I MnuA-like, EEP superfamily.
 
     0.899
AFU69759.1
Secreted lipoprotein.
  
     0.710
AFU69220.1
TonB-dependent outer membrane porin.
  
     0.655
AFU67156.1
Outer membrane protein, Bac_surface_Ag superfamily protein.
  
     0.630
AFU69053.1
Exosortase F-associated protein.
  
     0.627
AFU67389.1
Hypothetical protein.
  
     0.625
AFU69202.1
Transmembrane penicillinase antirepressor BlaR-like protein.
 
 
 0.615
AFU67698.1
Hypothetical protein.
 
 
 0.583
AFU68546.1
DUF3308 superfamily protein.
  
     0.558
Your Current Organism:
Psychroflexus torquis
NCBI taxonomy Id: 313595
Other names: P. torquis ATCC 700755, Psychroflexus torquis ACAM 623, Psychroflexus torquis ATCC 700755, Psychroflexus torquis str. ATCC 700755, Psychroflexus torquis strain ATCC 700755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.