STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFU68736.1Hypothetical protein. (536 aa)    
Predicted Functional Partners:
AFU70228.1
DUF490 superfamily protein.
  
     0.755
AFU67156.1
Outer membrane protein, Bac_surface_Ag superfamily protein.
  
     0.754
AFU67950.1
Hypothetical protein.
  
     0.745
AFU68566.1
Hypothetical protein.
  
     0.727
AFU68735.1
Phosphoribosyltransferase ComFC-like protein.
       0.714
rimP
Ribosome maturation protein, Sm_like superfamily; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
  
     0.713
AFU69596.1
Outer membrane protein transport protein, OMPP1/FadL/TodX family.
  
     0.704
AFU67827.1
DUF2723 superfamily protein.
  
     0.695
AFU68562.1
Membrane protein, BatI aerotolerance operon protein BatD.
  
     0.688
AFU70231.1
Organic solvent tolerance protein OstA.
  
     0.678
Your Current Organism:
Psychroflexus torquis
NCBI taxonomy Id: 313595
Other names: P. torquis ATCC 700755, Psychroflexus torquis ACAM 623, Psychroflexus torquis ATCC 700755, Psychroflexus torquis str. ATCC 700755, Psychroflexus torquis strain ATCC 700755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.